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	Mapping techniques for reference-based genome assembly Petrovský, Jan ; Sedlář, Karel (referee) ; Bartoň, Vojtěch (advisor) The bachelor thesis deals with the tools used to map the genome to the reference sequence. The theoretical part describes the currently used sequencing technologies, whether the first generation or the latest technologies of the third generation, an overview of the tools used for de novo genome construction, approaches and tools used for mapping to the reference, the ART program and related data formats. The practical part consists of creating a test dataset of NGS data and creating appropriate metrics to evaluate the quality of the mapping and their subsequent usage on the chosen mapping tools. Detailed record
	Variability identification in whole-genome assemblies Morávková, Dalena ; Škutková, Helena (referee) ; Bartoň, Vojtěch (advisor) This bachelor thesis deals with searching variable positions in the Treponema Pallidum genome. The theoretical part describes sequencing technologies, methods of genome assembly and variability of genome. The practical part includes processing data sequenced by Illumina sequencing technology and identification of variability in them. Detailed record
	Variability identification in whole-genome assemblies Morávková, Dalena ; Škutková, Helena (referee) ; Bartoň, Vojtěch (advisor) This bachelor thesis deals with searching variable positions in the Treponema Pallidum genome. The theoretical part describes sequencing technologies, methods of genome assembly and variability of genome. The practical part includes processing data sequenced by Illumina sequencing technology and identification of variability in them. Detailed record
	Variability identification in whole-genome assemblies Morávková, Dalena ; Škutková, Helena (referee) ; Bartoň, Vojtěch (advisor) This bachelor thesis deals with searching variable positions in the Treponema Pallidum genome. The theoretical part describes sequencing technologies, methods of genome assembly and variability of genome. The practical part includes processing data sequenced by Illumina sequencing technology and identification of variability in them. Detailed record
	Mapping techniques for reference-based genome assembly Petrovský, Jan ; Sedlář, Karel (referee) ; Bartoň, Vojtěch (advisor) The bachelor thesis deals with the tools used to map the genome to the reference sequence. The theoretical part describes the currently used sequencing technologies, whether the first generation or the latest technologies of the third generation, an overview of the tools used for de novo genome construction, approaches and tools used for mapping to the reference, the ART program and related data formats. The practical part consists of creating a test dataset of NGS data and creating appropriate metrics to evaluate the quality of the mapping and their subsequent usage on the chosen mapping tools. Detailed record

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